Teuchos_TimeMonitor.cpp

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#include "Teuchos_TimeMonitor.hpp"
#include "Teuchos_CommHelpers.hpp"
#include "Teuchos_DefaultComm.hpp"
#include "Teuchos_TableColumn.hpp"
#include "Teuchos_TableFormat.hpp"
#include "Teuchos_StandardParameterEntryValidators.hpp"
#include "Teuchos_ScalarTraits.hpp"
#include <functional>


namespace Teuchos {
  template<class Ordinal, class ScalarType, class IndexType>
  class MaxLoc :
    public ValueTypeReductionOp<Ordinal, std::pair<ScalarType, IndexType> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<ScalarType, IndexType> inBuffer[],
            std::pair<ScalarType, IndexType> inoutBuffer[]) const;
  };

  template<class Ordinal>
  class MaxLoc<Ordinal, double, int> :
    public ValueTypeReductionOp<Ordinal, std::pair<double, int> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<double, int> inBuffer[],
            std::pair<double, int> inoutBuffer[]) const
    {
      for (Ordinal ind = 0; ind < count; ++ind) {
        const std::pair<double, int>& in = inBuffer[ind];
        std::pair<double, int>& inout = inoutBuffer[ind];

        if (in.first > inout.first) {
          inout.first = in.first;
          inout.second = in.second;
        } else if (in.first < inout.first) {
          // Don't need to do anything; inout has the values.
        } else { // equal, or at least one is NaN.
          inout.first = in.first;
          inout.second = std::min (in.second, inout.second);
        }
      }
    }
  };

  template<class Ordinal, class ScalarType, class IndexType>
  class MinLoc :
    public ValueTypeReductionOp<Ordinal, std::pair<ScalarType, IndexType> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<ScalarType, IndexType> inBuffer[],
            std::pair<ScalarType, IndexType> inoutBuffer[]) const;
  };

  template<class Ordinal>
  class MinLoc<Ordinal, double, int> :
    public ValueTypeReductionOp<Ordinal, std::pair<double, int> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<double, int> inBuffer[],
            std::pair<double, int> inoutBuffer[]) const
    {
      for (Ordinal ind = 0; ind < count; ++ind) {
        const std::pair<double, int>& in = inBuffer[ind];
        std::pair<double, int>& inout = inoutBuffer[ind];

        if (in.first < inout.first) {
          inout.first = in.first;
          inout.second = in.second;
        } else if (in.first > inout.first) {
          // Don't need to do anything; inout has the values.
        } else { // equal, or at least one is NaN.
          inout.first = in.first;
          inout.second = std::min (in.second, inout.second);
        }
      }
    }
  };

  template<class Ordinal, class ScalarType, class IndexType>
  class MinLocNonzero :
    public ValueTypeReductionOp<Ordinal, std::pair<ScalarType, IndexType> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<ScalarType, IndexType> inBuffer[],
            std::pair<ScalarType, IndexType> inoutBuffer[]) const;
  };

  template<class Ordinal>
  class MinLocNonzero<Ordinal, double, int> :
    public ValueTypeReductionOp<Ordinal, std::pair<double, int> > {
  public:
    void
    reduce (const Ordinal count,
            const std::pair<double, int> inBuffer[],
            std::pair<double, int> inoutBuffer[]) const
    {
      for (Ordinal ind = 0; ind < count; ++ind) {
        const std::pair<double, int>& in = inBuffer[ind];
        std::pair<double, int>& inout = inoutBuffer[ind];

        if ( (in.first < inout.first && in.first != 0) || (inout.first == 0 && in.first != 0) ) {
          inout.first = in.first;
          inout.second = in.second;
        } else if (in.first > inout.first) {
          // Don't need to do anything; inout has the values.
        } else { // equal, or at least one is NaN.
          inout.first = in.first;
          inout.second = std::min (in.second, inout.second);
        }
      }
    }
  };

  // Typedef used internally by TimeMonitor::summarize() and its
  // helper functions.  The map is keyed on timer label (a string).
  // Each value is a pair: (total number of seconds over all calls to
  // that timer, total number of calls to that timer).
  typedef std::map<std::string, std::pair<double, int> > timer_map_t;

  TimeMonitor::TimeMonitor (Time& timer, bool reset)
    : PerformanceMonitorBase<Time>(timer, reset)
  {
    if (!isRecursiveCall()) counter().start(reset);
  }

  TimeMonitor::~TimeMonitor() {
    if (!isRecursiveCall()) counter().stop();
  }

  void
  TimeMonitor::disableTimer (const std::string& name)
  {
    RCP<Time> timer = lookupCounter (name);
    TEUCHOS_TEST_FOR_EXCEPTION(
      timer == null, std::invalid_argument,
      "TimeMonitor::disableTimer: Invalid timer \"" << name << "\"");
    timer->disable ();
  }

  void
  TimeMonitor::enableTimer (const std::string& name)
  {
    RCP<Time> timer = lookupCounter (name);
    TEUCHOS_TEST_FOR_EXCEPTION(
      timer == null, std::invalid_argument,
      "TimeMonitor::enableTimer: Invalid timer \"" << name << "\"");
    timer->enable ();
  }

  void
  TimeMonitor::zeroOutTimers()
  {
    typedef std::map<std::string, RCP<Time> > map_type;
    typedef map_type::iterator iter_type;
    map_type& ctrs = counters ();

    // In debug mode, loop first to check whether any of the timers
    // are running, before resetting them.  This ensures that this
    // method satisfies the strong exception guarantee (either it
    // completes normally, or there are no side effects).
#ifdef TEUCHOS_DEBUG
    for (iter_type it = ctrs.begin(); it != ctrs.end(); ++it) {
      // We throw a runtime_error rather than a logic_error, because
      // logic_error suggests a bug in the implementation of
      // TimeMonitor.  Calling zeroOutTimers() when a timer is running
      // is not TimeMonitor's fault.
      TEUCHOS_TEST_FOR_EXCEPTION(
        it->second->isRunning (), std::runtime_error,
        "Timer \"" << it->second->name () << "\" is currently running.  "
        "You are not allowed to reset running timers.");
    }
#endif // TEUCHOS_DEBUG

    for (iter_type it = ctrs.begin(); it != ctrs.end(); ++it) {
      it->second->reset ();
    }
  }

  // An anonymous namespace is the standard way of limiting linkage of
  // its contained routines to file scope.
  namespace {
    // \brief Return an "empty" local timer datum.
    //
    // "Empty" means the datum has zero elapsed time and zero call
    // count.  This function does not actually create a timer.
    //
    // \param name The timer's name.
    std::pair<std::string, std::pair<double, int> >
    makeEmptyTimerDatum (const std::string& name)
    {
      return std::make_pair (name, std::make_pair (double(0), int(0)));
    }

    // \fn collectLocalTimerData
    // \brief Collect and sort local timer data by timer names.
    //
    // \param localData [out] Map whose keys are the timer names, and
    //   whose value for each key is the total elapsed time (in
    //   seconds) and the call count for the timer with that name.
    //
    // \param localCounters [in] Timers from which to extract data.
    //
    // \param filter [in] Filter for timer labels.  If filter is not
    //   empty, this method will only collect data for local timers
    //   whose labels begin with this string.
    //
    // Extract the total elapsed time and call count from each timer
    // in the given array.  Merge results for timers with duplicate
    // labels, by summing their total elapsed times and call counts
    // pairwise.
    void
    collectLocalTimerData (timer_map_t& localData,
                           const std::map<std::string, RCP<Time> >& localCounters,
                           const std::string& filter="")
    {
      using std::make_pair;
      typedef timer_map_t::iterator iter_t;

      timer_map_t theLocalData;
      for (std::map<std::string, RCP<Time> >::const_iterator it = localCounters.begin();
           it != localCounters.end(); ++it) {
        const std::string& name = it->second->name ();

        // Filter current timer name, if provided filter is nonempty.
        // Filter string must _start_ the timer label, not just be in it.
        const bool skipThisOne = (filter != "" && name.find (filter) != 0);
        if (! skipThisOne) {
          const double timing = it->second->totalElapsedTime ();
          const int numCalls = it->second->numCalls ();

          // Merge timers with duplicate labels, by summing their
          // total elapsed times and call counts.
          iter_t loc = theLocalData.find (name);
          if (loc == theLocalData.end()) {
            // Use loc as an insertion location hint.
            theLocalData.insert (loc, make_pair (name, make_pair (timing, numCalls)));
          }
          else {
            loc->second.first += timing;
            loc->second.second += numCalls;
          }
        }
      }
      // This avoids copying the map, and also makes this method
      // satisfy the strong exception guarantee.
      localData.swap (theLocalData);
    }

    // \brief Locally filter out timer data with zero call counts.
    //
    // \param timerData [in/out]
    void
    filterZeroData (timer_map_t& timerData)
    {
      // FIXME (mfh 15 Mar 2013) Should use std::map::erase with
      // iterator hint, instead of rebuilding the map completely.
      timer_map_t newTimerData;
      for (timer_map_t::const_iterator it = timerData.begin();
           it != timerData.end(); ++it) {
        if (it->second.second > 0) {
          newTimerData[it->first] = it->second;
        }
      }
      timerData.swap (newTimerData);
    }

    void
    collectLocalTimerDataAndNames (timer_map_t& localTimerData,
                                   Array<std::string>& localTimerNames,
                                   const std::map<std::string, RCP<Time> >& localTimers,
                                   const bool writeZeroTimers,
                                   const std::string& filter="")
    {
      // Collect and sort local timer data by timer names.
      collectLocalTimerData (localTimerData, localTimers, filter);

      // Filter out zero data locally first.  This ensures that if we
      // are writing global stats, and if a timer name exists in the
      // set of global names, then that timer has a nonzero call count
      // on at least one MPI process.
      if (! writeZeroTimers) {
        filterZeroData (localTimerData);
      }

      // Extract the set of local timer names.  The std::map keeps
      // them sorted alphabetically.
      localTimerNames.reserve (localTimerData.size());
      for (timer_map_t::const_iterator it = localTimerData.begin();
           it != localTimerData.end(); ++it) {
        localTimerNames.push_back (it->first);
      }
    }

    void
    collectGlobalTimerData (timer_map_t& globalTimerData,
                            Array<std::string>& globalTimerNames,
                            timer_map_t& localTimerData,
                            Array<std::string>& localTimerNames,
                            Ptr<const Comm<int> > comm,
                            const bool alwaysWriteLocal,
                            const ECounterSetOp setOp)
    {
      // There may be some global timers that are not local timers on
      // the calling MPI process(es).  In that case, if
      // alwaysWriteLocal is true, then we need to fill in the
      // "missing" local timers.  That will ensure that both global
      // and local timer columns in the output table have the same
      // number of rows.  The collectLocalTimerDataAndNames() method
      // may have already filtered out local timers with zero call
      // counts (if its writeZeroTimers argument was false), but we
      // won't be filtering again.  Thus, any local timer data we
      // insert here won't get filtered out.
      //
      // Note that calling summarize() with writeZeroTimers == false
      // will still do what it says, even if we insert local timers
      // with zero call counts here.

      // This does the correct and inexpensive thing (just copies the
      // timer data) if numProcs == 1.  Otherwise, it initiates a
      // communication with \f$O(\log P)\f$ messages along the
      // critical path, where \f$P\f$ is the number of participating
      // processes.
      mergeCounterNames (*comm, localTimerNames, globalTimerNames, setOp);

#ifdef TEUCHOS_DEBUG
      {
        // Sanity check that all processes have the name number of
        // global timer names.
        const timer_map_t::size_type myNumGlobalNames = globalTimerNames.size();
        timer_map_t::size_type minNumGlobalNames = 0;
        timer_map_t::size_type maxNumGlobalNames = 0;
        reduceAll (*comm, REDUCE_MIN, myNumGlobalNames,
                   outArg (minNumGlobalNames));
        reduceAll (*comm, REDUCE_MAX, myNumGlobalNames,
                   outArg (maxNumGlobalNames));
        TEUCHOS_TEST_FOR_EXCEPTION(minNumGlobalNames != maxNumGlobalNames,
          std::logic_error, "Min # global timer names = " << minNumGlobalNames
          << " != max # global timer names = " << maxNumGlobalNames
          << ".  Please report this bug to the Teuchos developers.");
        TEUCHOS_TEST_FOR_EXCEPTION(myNumGlobalNames != minNumGlobalNames,
          std::logic_error, "My # global timer names = " << myNumGlobalNames
          << " != min # global timer names = " << minNumGlobalNames
          << ".  Please report this bug to the Teuchos developers.");
      }
#endif // TEUCHOS_DEBUG

      // mergeCounterNames() just merges the counters' names, not
      // their actual data.  Now we need to fill globalTimerData with
      // this process' timer data for the timers in globalTimerNames.
      //
      // All processes need the full list of global timers, since
      // there may be some global timers that are not local timers.
      // That's why mergeCounterNames() has to be an all-reduce, not
      // just a reduction to Proc 0.
      //
      // Insertion optimization: if the iterator given to map::insert
      // points right before where we want to insert, insertion is
      // O(1).  globalTimerNames is sorted, so feeding the iterator
      // output of map::insert into the next invocation's input should
      // make the whole insertion O(N) where N is the number of
      // entries in globalTimerNames.
      timer_map_t::iterator globalMapIter = globalTimerData.begin();
      timer_map_t::iterator localMapIter;
      for (Array<string>::const_iterator it = globalTimerNames.begin();
           it != globalTimerNames.end(); ++it) {
        const std::string& globalName = *it;
        localMapIter = localTimerData.find (globalName);

        if (localMapIter == localTimerData.end()) {
          if (alwaysWriteLocal) {
            // If there are some global timers that are not local
            // timers, and if we want to print local timers, we insert
            // a local timer datum with zero elapsed time and zero
            // call count into localTimerData as well.  This will
            // ensure that both global and local timer columns in the
            // output table have the same number of rows.
            //
            // We really only need to do this on Proc 0, which is the
            // only process that currently may print local timers.
            // However, we do it on all processes, just in case
            // someone later wants to modify this function to print
            // out local timer data for some process other than Proc
            // 0.  This extra computation won't affect the cost along
            // the critical path, for future computations in which
            // Proc 0 participates.
            localMapIter = localTimerData.insert (localMapIter, makeEmptyTimerDatum (globalName));

            // Make sure the missing global name gets added to the
            // list of local names.  We'll re-sort the list of local
            // names below.
            localTimerNames.push_back (globalName);
          }
          // There's a global timer that's not a local timer.  Add it
          // to our pre-merge version of the global timer data so that
          // we can safely merge the global timer data later.
          globalMapIter = globalTimerData.insert (globalMapIter, makeEmptyTimerDatum (globalName));
        }
        else {
          // We have this global timer name in our local timer list.
          // Fill in our pre-merge version of the global timer data
          // with our local data.
          globalMapIter = globalTimerData.insert (globalMapIter, std::make_pair (globalName, localMapIter->second));
        }
      }

      if (alwaysWriteLocal) {
        // Re-sort the list of local timer names, since we may have
        // inserted "missing" names above.
        std::sort (localTimerNames.begin(), localTimerNames.end());
      }

#ifdef TEUCHOS_DEBUG
      {
        // Sanity check that all processes have the name number of
        // global timers.
        const timer_map_t::size_type myNumGlobalTimers = globalTimerData.size();
        timer_map_t::size_type minNumGlobalTimers = 0;
        timer_map_t::size_type maxNumGlobalTimers = 0;
        reduceAll (*comm, REDUCE_MIN, myNumGlobalTimers,
                   outArg (minNumGlobalTimers));
        reduceAll (*comm, REDUCE_MAX, myNumGlobalTimers,
                   outArg (maxNumGlobalTimers));
        TEUCHOS_TEST_FOR_EXCEPTION(minNumGlobalTimers != maxNumGlobalTimers,
                                   std::logic_error, "Min # global timers = " << minNumGlobalTimers
                                   << " != max # global timers = " << maxNumGlobalTimers
                                   << ".  Please report this bug to the Teuchos developers.");
        TEUCHOS_TEST_FOR_EXCEPTION(myNumGlobalTimers != minNumGlobalTimers,
                                   std::logic_error, "My # global timers = " << myNumGlobalTimers
                                   << " != min # global timers = " << minNumGlobalTimers
                                   << ".  Please report this bug to the Teuchos developers.");
      }
#endif // TEUCHOS_DEBUG
    }

    void
    computeGlobalTimerStats (stat_map_type& statData,
                             std::vector<std::string>& statNames,
                             Ptr<const Comm<int> > comm,
                             const timer_map_t& globalTimerData,
                             const bool ignoreZeroTimers)
    {
      using Teuchos::ScalarTraits;

      const int numTimers = static_cast<int> (globalTimerData.size());
      const int numProcs = comm->getSize();

      // Extract pre-reduction timings and call counts into a
      // sequential array.  This array will be in the same order as
      // the global timer names are in the map.
      Array<std::pair<double, int> > timingsAndCallCounts;
      timingsAndCallCounts.reserve (numTimers);
      for (timer_map_t::const_iterator it = globalTimerData.begin();
           it != globalTimerData.end(); ++it) {
        timingsAndCallCounts.push_back (it->second);
      }

      // For each timer name, compute the min timing and its
      // corresponding call count.  If two processes have the same
      // timing but different call counts, the minimum call count will
      // be used.
      Array<std::pair<double, int> > minTimingsAndCallCounts (numTimers);
      if (numTimers > 0) {
        if (ignoreZeroTimers)
          reduceAll (*comm, MinLocNonzero<int, double, int>(), numTimers,
                     &timingsAndCallCounts[0], &minTimingsAndCallCounts[0]);
        else
          reduceAll (*comm, MinLoc<int, double, int>(), numTimers,
                     &timingsAndCallCounts[0], &minTimingsAndCallCounts[0]);
      }

      // For each timer name, compute the max timing and its
      // corresponding call count.  If two processes have the same
      // timing but different call counts, the minimum call count will
      // be used.
      Array<std::pair<double, int> > maxTimingsAndCallCounts (numTimers);
      if (numTimers > 0) {
        reduceAll (*comm, MaxLoc<int, double, int>(), numTimers,
                   &timingsAndCallCounts[0], &maxTimingsAndCallCounts[0]);
      }

      // For each timer name, compute the mean-over-processes timing,
      // the mean call count, and the mean-over-call-counts timing.
      // The mean call count is reported as a double to allow a
      // fractional value.
      //
      // Each local timing is really the total timing over all local
      // invocations.  The number of local invocations is the call
      // count.  Thus, the mean-over-call-counts timing is the sum of
      // all the timings (over all processes), divided by the sum of
      // all the call counts (over all processes).  We compute it in a
      // different way to over unnecessary overflow.
      Array<double> meanOverCallCountsTimings (numTimers);
      Array<double> meanOverProcsTimings (numTimers);
      Array<double> meanCallCounts (numTimers);
      Array<int>    ICallThisTimer (numTimers);
      Array<int>    numProcsCallingEachTimer (numTimers);
      {
        // Figure out how many processors actually call each timer.
        if (ignoreZeroTimers) {
          for (int k = 0; k < numTimers; ++k) {
            const double callCount = static_cast<double> (timingsAndCallCounts[k].second);
            if (callCount > 0) ICallThisTimer[k] = 1;
            else               ICallThisTimer[k] = 0;
          }
          if (numTimers > 0) {
            reduceAll (*comm, REDUCE_SUM, numTimers, &ICallThisTimer[0],
                       &numProcsCallingEachTimer[0]);
          }
        }

        // When summing, first scale by the number of processes.  This
        // avoids unnecessary overflow, and also gives us the mean
        // call count automatically.
        Array<double> scaledTimings (numTimers);
        Array<double> scaledCallCounts (numTimers);
        const double P = static_cast<double> (numProcs);

        if (ignoreZeroTimers) {
          for (int k = 0; k < numTimers; ++k) {
            const double timing = timingsAndCallCounts[k].first;
            const double callCount = static_cast<double> (timingsAndCallCounts[k].second);

            scaledTimings[k] = timing / numProcsCallingEachTimer[k];
            scaledCallCounts[k] = callCount / numProcsCallingEachTimer[k];
          }
        }
        else {
          for (int k = 0; k < numTimers; ++k) {
            const double timing = timingsAndCallCounts[k].first;
            const double callCount = static_cast<double> (timingsAndCallCounts[k].second);

            scaledTimings[k] = timing / P;
            scaledCallCounts[k] = callCount / P;
          }
        }

        if (numTimers > 0) {
          reduceAll (*comm, REDUCE_SUM, numTimers, &scaledTimings[0],
                     &meanOverProcsTimings[0]);
          reduceAll (*comm, REDUCE_SUM, numTimers, &scaledCallCounts[0],
                     &meanCallCounts[0]);
        }
        // We don't have to undo the scaling for the mean timings;
        // just divide by the scaled call count.
        for (int k = 0; k < numTimers; ++k) {
          if (meanCallCounts[k] > ScalarTraits<double>::zero ()) {
            meanOverCallCountsTimings[k] = meanOverProcsTimings[k] / meanCallCounts[k];
          }
          else {
            meanOverCallCountsTimings[k] = ScalarTraits<double>::zero ();
          }
        }
      }

      // Reformat the data into the map of statistics.  Be sure that
      // each value (the std::vector of (timing, call count) pairs,
      // each entry of which is a different statistic) preserves the
      // order of statNames.
      statNames.resize (4);
      statNames[0] = "MinOverProcs";
      statNames[1] = "MeanOverProcs";
      statNames[2] = "MaxOverProcs";
      statNames[3] = "MeanOverCallCounts";

      stat_map_type::iterator statIter = statData.end();
      timer_map_t::const_iterator it = globalTimerData.begin();
      for (int k = 0; it != globalTimerData.end(); ++k, ++it) {
        std::vector<std::pair<double, double> > curData (4);
        curData[0] = minTimingsAndCallCounts[k];
        curData[1] = std::make_pair (meanOverProcsTimings[k], meanCallCounts[k]);
        curData[2] = maxTimingsAndCallCounts[k];
        curData[3] = std::make_pair (meanOverCallCountsTimings[k], meanCallCounts[k]);

        // statIter gives an insertion location hint that makes each
        // insertion O(1), since we remember the location of the last
        // insertion.
        statIter = statData.insert (statIter, std::make_pair (it->first, curData));
      }
    }


    RCP<const Comm<int> >
    getDefaultComm ()
    {
      // The default communicator.  If Trilinos was built with MPI
      // enabled, this should be MPI_COMM_WORLD.  (If MPI has not yet
      // been initialized, it's not valid to use the communicator!)
      // Otherwise, this should be a "serial" (no MPI, one "process")
      // communicator.
      RCP<const Comm<int> > comm = DefaultComm<int>::getComm ();

#ifdef HAVE_MPI
      {
        int mpiHasBeenStarted = 0;
        MPI_Initialized (&mpiHasBeenStarted);
        if (! mpiHasBeenStarted) {
          // Make pComm a new "serial communicator."
          comm = rcp_implicit_cast<const Comm<int> > (rcp (new SerialComm<int> ()));
        }
      }
#endif // HAVE_MPI
      return comm;
    }

  } // namespace (anonymous)


  void
  TimeMonitor::computeGlobalTimerStatistics (stat_map_type& statData,
                                             std::vector<std::string>& statNames,
                                             Ptr<const Comm<int> > comm,
                                             const ECounterSetOp setOp,
                                             const std::string& filter)
  {
    // Collect local timer data and names.  Filter out timers with
    // zero call counts if writeZeroTimers is false.  Also, apply the
    // timer label filter at this point, so we don't have to compute
    // statistics on timers we don't want to display anyway.
    timer_map_t localTimerData;
    Array<std::string> localTimerNames;
    const bool writeZeroTimers = false;
    collectLocalTimerDataAndNames (localTimerData, localTimerNames,
                                   counters(), writeZeroTimers, filter);
    // Merge the local timer data and names into global timer data and
    // names.
    timer_map_t globalTimerData;
    Array<std::string> globalTimerNames;
    const bool alwaysWriteLocal = false;
    collectGlobalTimerData (globalTimerData, globalTimerNames,
                            localTimerData, localTimerNames,
                            comm, alwaysWriteLocal, setOp);
    // Compute statistics on the data.
    computeGlobalTimerStats (statData, statNames, comm, globalTimerData, false);
  }


  void
  TimeMonitor::summarize (Ptr<const Comm<int> > comm,
                          std::ostream& out,
                          const bool alwaysWriteLocal,
                          const bool writeGlobalStats,
                          const bool writeZeroTimers,
                          const ECounterSetOp setOp,
                          const std::string& filter,
                          const bool ignoreZeroTimers)
  {
    //
    // We can't just call computeGlobalTimerStatistics(), since
    // summarize() has different options that affect whether global
    // statistics are computed and printed.
    //
    const int numProcs = comm->getSize();
    const int myRank = comm->getRank();

    // Collect local timer data and names.  Filter out timers with
    // zero call counts if writeZeroTimers is false.  Also, apply the
    // timer label filter at this point, so we don't have to compute
    // statistics on timers we don't want to display anyway.
    timer_map_t localTimerData;
    Array<std::string> localTimerNames;
    collectLocalTimerDataAndNames (localTimerData, localTimerNames,
                                   counters(), writeZeroTimers, filter);

    // If we're computing global statistics, merge the local timer
    // data and names into global timer data and names, and compute
    // global timer statistics.  Otherwise, leave the global data
    // empty.
    timer_map_t globalTimerData;
    Array<std::string> globalTimerNames;
    stat_map_type statData;
    std::vector<std::string> statNames;
    if (writeGlobalStats) {
      collectGlobalTimerData (globalTimerData, globalTimerNames,
                              localTimerData, localTimerNames,
                              comm, alwaysWriteLocal, setOp);
      // Compute statistics on the data, but only if the communicator
      // contains more than one process.  Otherwise, statistics don't
      // make sense and we don't print them (see below).
      if (numProcs > 1) {
        computeGlobalTimerStats (statData, statNames, comm, globalTimerData, ignoreZeroTimers);
      }
    }

    // Precision of floating-point numbers in the table.
    const int precision = format().precision();

    // All columns of the table, in order.
    Array<TableColumn> tableColumns;

    // Labels of all the columns of the table.
    // We will append to this when we add each column.
    Array<std::string> titles;

    // Widths (in number of characters) of each column.
    // We will append to this when we add each column.
    Array<int> columnWidths;

    // Table column containing all timer names.  If writeGlobalStats
    // is true, we use the global timer names, otherwise we use the
    // local timer names.  We build the table on all processes
    // redundantly, but only print on Rank 0.
    {
      titles.append ("Timer Name");

      // The column labels depend on whether we are computing global statistics.
      TableColumn nameCol (writeGlobalStats ? globalTimerNames : localTimerNames);
      tableColumns.append (nameCol);

      // Each column is as wide as it needs to be to hold both its
      // title and all of the column data.  This column's title is the
      // current last entry of the titles array.
      columnWidths.append (format().computeRequiredColumnWidth (titles.back(), nameCol));
    }

    // Table column containing local timer stats, if applicable.  We
    // only write local stats if asked, only on MPI Proc 0, and only
    // if there is more than one MPI process in the communicator
    // (otherwise local stats == global stats, so we just print the
    // global stats).  In this case, we've padded the local data on
    // Proc 0 if necessary to match the global timer list, so that the
    // columns have the same number of rows.
    if (alwaysWriteLocal && numProcs > 1 && myRank == 0) {
      titles.append ("Local time (num calls)");

      // Copy local timer data out of the array-of-structs into
      // separate arrays, for display in the table.
      Array<double> localTimings;
      Array<double> localNumCalls;
      for (timer_map_t::const_iterator it = localTimerData.begin();
           it != localTimerData.end(); ++it) {
        localTimings.push_back (it->second.first);
        localNumCalls.push_back (static_cast<double> (it->second.second));
      }
      TableColumn timeAndCalls (localTimings, localNumCalls, precision, true);
      tableColumns.append (timeAndCalls);
      columnWidths.append (format().computeRequiredColumnWidth (titles.back(), timeAndCalls));
    }

    if (writeGlobalStats) {
      // If there's only 1 process in the communicator, don't display
      // statistics; statistics don't make sense in that case.  Just
      // display the timings and call counts.  If there's more than 1
      // process, do display statistics.
      if (numProcs == 1) {
        // Extract timings and the call counts from globalTimerData.
        Array<double> globalTimings;
        Array<double> globalNumCalls;
        for (timer_map_t::const_iterator it = globalTimerData.begin();
             it != globalTimerData.end(); ++it) {
          globalTimings.push_back (it->second.first);
          globalNumCalls.push_back (static_cast<double> (it->second.second));
        }
        // Print the table column.
        titles.append ("Global time (num calls)");
        TableColumn timeAndCalls (globalTimings, globalNumCalls, precision, true);
        tableColumns.append (timeAndCalls);
        columnWidths.append (format().computeRequiredColumnWidth (titles.back(), timeAndCalls));
      }
      else { // numProcs > 1
        // Print a table column for each statistic.  statNames and
        // each value in statData use the same ordering, so we can
        // iterate over valid indices of statNames to display the
        // statistics in the right order.
        const timer_map_t::size_type numGlobalTimers = globalTimerData.size();
        for (std::vector<std::string>::size_type statInd = 0; statInd < statNames.size(); ++statInd) {
          // Extract lists of timings and their call counts for the
          // current statistic.
          Array<double> statTimings (numGlobalTimers);
          Array<double> statCallCounts (numGlobalTimers);
          stat_map_type::const_iterator it = statData.begin();
          for (int k = 0; it != statData.end(); ++it, ++k) {
            statTimings[k] = (it->second[statInd]).first;
            statCallCounts[k] = (it->second[statInd]).second;
          }
          // Print the table column.
          const std::string& statisticName = statNames[statInd];
          const std::string titleString = statisticName;
          titles.append (titleString);
          TableColumn timeAndCalls (statTimings, statCallCounts, precision, true);
          tableColumns.append (timeAndCalls);
          columnWidths.append (format().computeRequiredColumnWidth (titles.back(), timeAndCalls));
        }
      }
    }

    // Print the whole table to the given output stream on MPI Rank 0.
    format().setColumnWidths (columnWidths);
    if (myRank == 0) {
      std::ostringstream theTitle;
      theTitle << "TimeMonitor results over " << numProcs << " processor"
               << (numProcs > 1 ? "s" : "");
      format().writeWholeTable (out, theTitle.str(), titles, tableColumns);
    }
  }

  void
  TimeMonitor::summarize (std::ostream &out,
                          const bool alwaysWriteLocal,
                          const bool writeGlobalStats,
                          const bool writeZeroTimers,
                          const ECounterSetOp setOp,
                          const std::string& filter,
                          const bool ignoreZeroTimers)
  {
    // The default communicator.  If Trilinos was built with MPI
    // enabled, this should be MPI_COMM_WORLD.  Otherwise, this should
    // be a "serial" (no MPI, one "process") communicator.
    RCP<const Comm<int> > comm = getDefaultComm();

    summarize (comm.ptr(), out, alwaysWriteLocal,
               writeGlobalStats, writeZeroTimers, setOp, filter, ignoreZeroTimers);
  }

  void
  TimeMonitor::computeGlobalTimerStatistics (stat_map_type& statData,
                                             std::vector<std::string>& statNames,
                                             const ECounterSetOp setOp,
                                             const std::string& filter)
  {
    // The default communicator.  If Trilinos was built with MPI
    // enabled, this should be MPI_COMM_WORLD.  Otherwise, this should
    // be a "serial" (no MPI, one "process") communicator.
    RCP<const Comm<int> > comm = getDefaultComm();

    computeGlobalTimerStatistics (statData, statNames, comm.ptr(), setOp, filter);
  }


  namespace {
    std::string
    quoteLabelForYaml (const std::string& label)
    {
      // YAML allows empty keys in key: value pairs.  See Section 7.2
      // of the YAML 1.2 spec.  We thus let an empty label pass
      // through without quoting or other special treatment.
      if (label.empty ()) {
        return label;
      }

      // Check whether the label is already quoted.  If so, we don't
      // need to quote it again.  However, we do need to quote any
      // quote symbols in the string inside the outer quotes.
      const bool alreadyQuoted = label.size () >= 2 &&
        label[0] == '"' && label[label.size() - 1] == '"';

      // We need to quote if there are any colons or (inner) quotes in
      // the string.  We'll determine this as we read through the
      // string and escape any characters that need escaping.
      bool needToQuote = false;

      std::string out; // To fill with the return value
      out.reserve (label.size ());

      const size_t startPos = alreadyQuoted ? 1 : 0;
      const size_t endPos = alreadyQuoted ? label.size () - 1 : label.size ();
      for (size_t i = startPos; i < endPos; ++i) {
        const char c = label[i];
        if (c == '"' || c == '\\') {
          out.push_back ('\\'); // Escape the quote or backslash.
          needToQuote = true;
        }
        else if (c == ':') {
          needToQuote = true;
        }
        out.push_back (c);
      }

      if (needToQuote || alreadyQuoted) {
        // If the input string was already quoted, then out doesn't
        // include its quotes, so we have to add them back in.
        return "\"" + out + "\"";
      }
      else {
        return out;
      }
    }

  } // namespace (anonymous)


  void TimeMonitor::
  summarizeToYaml (Ptr<const Comm<int> > comm,
                   std::ostream &out,
                   const ETimeMonitorYamlFormat yamlStyle,
                   const std::string& filter)
  {
    using Teuchos::FancyOStream;
    using Teuchos::fancyOStream;
    using Teuchos::getFancyOStream;
    using Teuchos::OSTab;
    using Teuchos::RCP;
    using Teuchos::rcpFromRef;
    using std::endl;
    typedef std::vector<std::string>::size_type size_type;

    const bool compact = (yamlStyle == YAML_FORMAT_COMPACT);

    // const bool writeGlobalStats = true;
    // const bool writeZeroTimers = true;
    // const bool alwaysWriteLocal = false;
    const ECounterSetOp setOp = Intersection;

    stat_map_type statData;
    std::vector<std::string> statNames;
    computeGlobalTimerStatistics (statData, statNames, comm, setOp, filter);

    const int numProcs = comm->getSize();

    // HACK (mfh 20 Aug 2012) For some reason, creating OSTab with "-
    // " as the line prefix does not work, else I would prefer that
    // method for printing each line of a YAML block sequence (see
    // Section 8.2.1 of the YAML 1.2 spec).
    //
    // Also, I have to set the tab indent string here, rather than in
    // OSTab's constructor.  This is because line prefix (which for
    // some reason is what OSTab's constructor takes, rather than tab
    // indent string) means something different from tab indent
    // string, and turning on the line prefix prints all sorts of
    // things including "|" for some reason.
    RCP<FancyOStream> pfout = getFancyOStream (rcpFromRef (out));
    pfout->setTabIndentStr ("  ");
    FancyOStream& fout = *pfout;

    fout << "# Teuchos::TimeMonitor report" << endl
         << "---" << endl;

    // mfh 19 Aug 2012: An important goal of our chosen output format
    // was to minimize the nesting depth.  We have managed to keep the
    // nesting depth to 3, which is the limit that the current version
    // of PylotDB imposes for its YAML input.

    // Outermost level is a dictionary.  (Individual entries of a
    // dictionary do _not_ begin with "- ".)  We always print the
    // outermost level in standard style, not flow style, for better
    // readability.  We begin the outermost level with metadata.
    fout << "Output mode: " << (compact ? "compact" : "spacious") << endl
         << "Number of processes: " << numProcs << endl
         << "Time unit: s" << endl;
    // For a key: value pair where the value is a sequence or
    // dictionary on the following line, YAML requires a space after
    // the colon.
    fout << "Statistics collected: ";
    // Print list of the names of all the statistics we collected.
    if (compact) {
      fout << " [";
      for (size_type i = 0; i < statNames.size (); ++i) {
        fout << quoteLabelForYaml (statNames[i]);
        if (i + 1 < statNames.size ()) {
          fout << ", ";
        }
      }
      fout << "]" << endl;
    }
    else {
      fout << endl;
      OSTab tab1 (pfout);
      for (size_type i = 0; i < statNames.size (); ++i) {
        fout << "- " << quoteLabelForYaml (statNames[i]) << endl;
      }
    }

    // Print the list of timer names.
    //
    // It might be nicer instead to print a map from timer name to all
    // of its data, but keeping the maximum nesting depth small
    // ensures better compatibility with different parsing tools.
    fout << "Timer names: ";
    if (compact) {
      fout << " [";
      size_type ind = 0;
      for (stat_map_type::const_iterator it = statData.begin();
           it != statData.end(); ++it, ++ind) {
        fout << quoteLabelForYaml (it->first);
        if (ind + 1 < statData.size ()) {
          fout << ", ";
        }
      }
      fout << "]" << endl;
    }
    else {
      fout << endl;
      OSTab tab1 (pfout);
      for (stat_map_type::const_iterator it = statData.begin();
           it != statData.end(); ++it) {
        fout << "- " << quoteLabelForYaml (it->first) << endl;
      }
    }

    // Print times for each timer, as a map from statistic name to its time.
    fout << "Total times: ";
    if (compact) {
      fout << " {";
      size_type outerInd = 0;
      for (stat_map_type::const_iterator outerIter = statData.begin();
           outerIter != statData.end(); ++outerIter, ++outerInd) {
        // Print timer name.
        fout << quoteLabelForYaml (outerIter->first) << ": ";
        // Print that timer's data.
        const std::vector<std::pair<double, double> >& curData = outerIter->second;
        fout << "{";
        for (size_type innerInd = 0; innerInd < curData.size (); ++innerInd) {
          fout << quoteLabelForYaml (statNames[innerInd]) << ": "
               << curData[innerInd].first;
          if (innerInd + 1 < curData.size ()) {
            fout << ", ";
          }
        }
        fout << "}";
        if (outerInd + 1 < statData.size ()) {
          fout << ", ";
        }
      }
      fout << "}" << endl;
    }
    else {
      fout << endl;
      OSTab tab1 (pfout);
      size_type outerInd = 0;
      for (stat_map_type::const_iterator outerIter = statData.begin();
           outerIter != statData.end(); ++outerIter, ++outerInd) {
        // Print timer name.
        fout << quoteLabelForYaml (outerIter->first) << ": " << endl;
        // Print that timer's data.
        OSTab tab2 (pfout);
        const std::vector<std::pair<double, double> >& curData = outerIter->second;
        for (size_type innerInd = 0; innerInd < curData.size (); ++innerInd) {
          fout << quoteLabelForYaml (statNames[innerInd]) << ": "
               << curData[innerInd].first << endl;
        }
      }
    }

    // Print call counts for each timer, for each statistic name.
    fout << "Call counts:";
    if (compact) {
      fout << " {";
      size_type outerInd = 0;
      for (stat_map_type::const_iterator outerIter = statData.begin();
           outerIter != statData.end(); ++outerIter, ++outerInd) {
        // Print timer name.
        fout << quoteLabelForYaml (outerIter->first) << ": ";
        // Print that timer's data.
        const std::vector<std::pair<double, double> >& curData = outerIter->second;
        fout << "{";
        for (size_type innerInd = 0; innerInd < curData.size (); ++innerInd) {
          fout << quoteLabelForYaml (statNames[innerInd]) << ": "
               << curData[innerInd].second;
          if (innerInd + 1 < curData.size ()) {
            fout << ", ";
          }
        }
        fout << "}";
        if (outerInd + 1 < statData.size ()) {
          fout << ", ";
        }
      }
      fout << "}" << endl;
    }
    else {
      fout << endl;
      OSTab tab1 (pfout);
      size_type outerInd = 0;
      for (stat_map_type::const_iterator outerIter = statData.begin();
           outerIter != statData.end(); ++outerIter, ++outerInd) {
        // Print timer name.
        fout << quoteLabelForYaml (outerIter->first) << ": " << endl;
        // Print that timer's data.
        OSTab tab2 (pfout);
        const std::vector<std::pair<double, double> >& curData = outerIter->second;
        for (size_type innerInd = 0; innerInd < curData.size (); ++innerInd) {
          fout << quoteLabelForYaml (statNames[innerInd]) << ": "
               << curData[innerInd].second << endl;
        }
      }
    }
  }

  void TimeMonitor::
  summarizeToYaml (std::ostream &out,
                   const ETimeMonitorYamlFormat yamlStyle,
                   const std::string& filter)
  {
    // The default communicator.  If Trilinos was built with MPI
    // enabled, this should be MPI_COMM_WORLD.  Otherwise, this should
    // be a "serial" (no MPI, one "process") communicator.
    RCP<const Comm<int> > comm = getDefaultComm ();

    summarizeToYaml (comm.ptr (), out, yamlStyle, filter);
  }

  // Default value is false.  We'll set to true once
  // setReportParameters() completes successfully.
  bool TimeMonitor::setParams_ = false;

  // We have to declare all of these here in order to avoid linker errors.
  TimeMonitor::ETimeMonitorReportFormat TimeMonitor::reportFormat_ = TimeMonitor::REPORT_FORMAT_TABLE;
  TimeMonitor::ETimeMonitorYamlFormat TimeMonitor::yamlStyle_ = TimeMonitor::YAML_FORMAT_SPACIOUS;
  ECounterSetOp TimeMonitor::setOp_ = Intersection;
  bool TimeMonitor::alwaysWriteLocal_ = false;
  bool TimeMonitor::writeGlobalStats_ = true;
  bool TimeMonitor::writeZeroTimers_ = true;

  void
  TimeMonitor::setReportFormatParameter (ParameterList& plist)
  {
    const std::string name ("Report format");
    const std::string defaultValue ("Table");
    const std::string docString ("Output format for report of timer statistics");
    Array<std::string> strings;
    Array<std::string> docs;
    Array<ETimeMonitorReportFormat> values;

    strings.push_back ("YAML");
    docs.push_back ("YAML (see yaml.org) format");
    values.push_back (REPORT_FORMAT_YAML);
    strings.push_back ("Table");
    docs.push_back ("Tabular format via Teuchos::TableFormat");
    values.push_back (REPORT_FORMAT_TABLE);

    setStringToIntegralParameter<ETimeMonitorReportFormat> (name, defaultValue,
                                                            docString,
                                                            strings (), docs (),
                                                            values (), &plist);
  }

  void
  TimeMonitor::setYamlFormatParameter (ParameterList& plist)
  {
    const std::string name ("YAML style");
    const std::string defaultValue ("spacious");
    const std::string docString ("YAML-specific output format");
    Array<std::string> strings;
    Array<std::string> docs;
    Array<ETimeMonitorYamlFormat> values;

    strings.push_back ("compact");
    docs.push_back ("Compact format: use \"flow style\" (see YAML 1.2 spec at "
                    "yaml.org) for most sequences except the outermost sequence");
    values.push_back (YAML_FORMAT_COMPACT);

    strings.push_back ("spacious");
    docs.push_back ("Spacious format: avoid flow style");
    values.push_back (YAML_FORMAT_SPACIOUS);

    setStringToIntegralParameter<ETimeMonitorYamlFormat> (name, defaultValue,
                                                          docString,
                                                          strings (), docs (),
                                                          values (), &plist);
  }

  void
  TimeMonitor::setSetOpParameter (ParameterList& plist)
  {
    const std::string name ("How to merge timer sets");
    const std::string defaultValue ("Intersection");
    const std::string docString ("How to merge differing sets of timers "
                                 "across processes");
    Array<std::string> strings;
    Array<std::string> docs;
    Array<ECounterSetOp> values;

    strings.push_back ("Intersection");
    docs.push_back ("Compute intersection of timer sets over processes");
    values.push_back (Intersection);
    strings.push_back ("Union");
    docs.push_back ("Compute union of timer sets over processes");
    values.push_back (Union);

    setStringToIntegralParameter<ECounterSetOp> (name, defaultValue, docString,
                                                 strings (), docs (), values (),
                                                 &plist);
  }

  RCP<const ParameterList>
  TimeMonitor::getValidReportParameters ()
  {
    // Our implementation favors recomputation over persistent
    // storage.  That is, we simply recreate the list every time we
    // need it.
    RCP<ParameterList> plist = parameterList ("TimeMonitor::report");

    const bool alwaysWriteLocal = false;
    const bool writeGlobalStats = true;
    const bool writeZeroTimers = true;

    setReportFormatParameter (*plist);
    setYamlFormatParameter (*plist);
    setSetOpParameter (*plist);
    plist->set ("alwaysWriteLocal", alwaysWriteLocal,
                "Always output local timers' values on Proc 0");
    plist->set ("writeGlobalStats", writeGlobalStats, "Always output global "
                "statistics, even if there is only one process in the "
                "communicator");
    plist->set ("writeZeroTimers", writeZeroTimers, "Generate output for "
                "timers that have never been called");

    return rcp_const_cast<const ParameterList> (plist);
  }

  void
  TimeMonitor::setReportParameters (const RCP<ParameterList>& params)
  {
    ETimeMonitorReportFormat reportFormat = REPORT_FORMAT_TABLE;
    ETimeMonitorYamlFormat yamlStyle = YAML_FORMAT_SPACIOUS;
    ECounterSetOp setOp = Intersection;
    bool alwaysWriteLocal = false;
    bool writeGlobalStats = true;
    bool writeZeroTimers = true;

    if (params.is_null ()) {
      // If we've set parameters before, leave their current values.
      // Otherwise, set defaults (below).
      if (setParams_) {
        return;
      }
    }
    else { // params is nonnull.  Let's read it!
      params->validateParametersAndSetDefaults (*getValidReportParameters ());

      reportFormat = getIntegralValue<ETimeMonitorReportFormat> (*params, "Report format");
      yamlStyle = getIntegralValue<ETimeMonitorYamlFormat> (*params, "YAML style");
      setOp = getIntegralValue<ECounterSetOp> (*params, "How to merge timer sets");
      alwaysWriteLocal = params->get<bool> ("alwaysWriteLocal");
      writeGlobalStats = params->get<bool> ("writeGlobalStats");
      writeZeroTimers = params->get<bool> ("writeZeroTimers");
    }
    // Defer setting state until here, to ensure the strong exception
    // guarantee for this method (either it throws with no externally
    // visible state changes, or it returns normally).
    reportFormat_ = reportFormat;
    yamlStyle_ = yamlStyle;
    setOp_ = setOp;
    alwaysWriteLocal_ = alwaysWriteLocal;
    writeGlobalStats_ = writeGlobalStats;
    writeZeroTimers_ = writeZeroTimers;

    setParams_ = true; // Yay, we successfully set parameters!
  }

  void
  TimeMonitor::report (Ptr<const Comm<int> > comm,
                       std::ostream& out,
                       const std::string& filter,
                       const RCP<ParameterList>& params)
  {
    setReportParameters (params);

    if (reportFormat_ == REPORT_FORMAT_YAML) {
      summarizeToYaml (comm, out, yamlStyle_, filter);
    }
    else if (reportFormat_ == REPORT_FORMAT_TABLE) {
      summarize (comm, out, alwaysWriteLocal_, writeGlobalStats_,
                 writeZeroTimers_, setOp_, filter);
    }
    else {
      TEUCHOS_TEST_FOR_EXCEPTION(true, std::logic_error, "TimeMonitor::report: "
        "Invalid report format.  This should never happen; ParameterList "
        "validation should have caught this.  Please report this bug to the "
        "Teuchos developers.");
    }
  }

  void
  TimeMonitor::report (Ptr<const Comm<int> > comm,
                       std::ostream& out,
                       const RCP<ParameterList>& params)
  {
    report (comm, out, "", params);
  }

  void
  TimeMonitor::report (std::ostream& out,
                       const std::string& filter,
                       const RCP<ParameterList>& params)
  {
    RCP<const Comm<int> > comm = getDefaultComm ();
    report (comm.ptr (), out, filter, params);
  }

  void
  TimeMonitor::report (std::ostream& out,
                       const RCP<ParameterList>& params)
  {
    RCP<const Comm<int> > comm = getDefaultComm ();
    report (comm.ptr (), out, "", params);
  }

} // namespace Teuchos