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Zoltan2
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00001 // @HEADER 00002 // 00003 // *********************************************************************** 00004 // 00005 // Zoltan2: A package of combinatorial algorithms for scientific computing 00006 // Copyright 2012 Sandia Corporation 00007 // 00008 // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, 00009 // the U.S. Government retains certain rights in this software. 00010 // 00011 // Redistribution and use in source and binary forms, with or without 00012 // modification, are permitted provided that the following conditions are 00013 // met: 00014 // 00015 // 1. Redistributions of source code must retain the above copyright 00016 // notice, this list of conditions and the following disclaimer. 00017 // 00018 // 2. Redistributions in binary form must reproduce the above copyright 00019 // notice, this list of conditions and the following disclaimer in the 00020 // documentation and/or other materials provided with the distribution. 00021 // 00022 // 3. Neither the name of the Corporation nor the names of the 00023 // contributors may be used to endorse or promote products derived from 00024 // this software without specific prior written permission. 00025 // 00026 // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY 00027 // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00028 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR 00029 // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE 00030 // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 00031 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 00032 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR 00033 // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF 00034 // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING 00035 // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS 00036 // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00037 // 00038 // Questions? Contact Karen Devine (kddevin@sandia.gov) 00039 // Erik Boman (egboman@sandia.gov) 00040 // Siva Rajamanickam (srajama@sandia.gov) 00041 // 00042 // *********************************************************************** 00043 // 00044 // @HEADER 00045 #ifndef _ZOLTAN2_ALGRANDOM_HPP_ 00046 #define _ZOLTAN2_ALGRANDOM_HPP_ 00047 00048 #include <Zoltan2_Algorithm.hpp> 00049 #include <Zoltan2_IdentifierModel.hpp> 00050 #include <Zoltan2_OrderingSolution.hpp> 00051 00052 00053 namespace Zoltan2{ 00054 00059 00060 template <typename Adapter> 00061 class AlgRandom : public Algorithm<Adapter> 00062 { 00063 private: 00064 00065 const RCP<IdentifierModel<Adapter> > model; 00066 const RCP<Teuchos::ParameterList> &pl; 00067 const RCP<Teuchos::Comm<int> > &comm; 00068 00069 public: 00070 00071 typedef typename Adapter::lno_t lno_t; 00072 typedef typename Adapter::zgid_t zgid_t; 00073 00074 AlgRandom( 00075 const RCP<IdentifierModel<Adapter> > &model__, 00076 const RCP<Teuchos::ParameterList> &pl__, 00077 const RCP<Teuchos::Comm<int> > &comm__ 00078 ) : model(model__), pl(pl__), comm(comm__) 00079 { 00080 } 00081 00082 int order(const RCP<OrderingSolution<zgid_t, lno_t> > &solution) 00083 { 00084 00085 int ierr= 0; 00086 00087 HELLO; 00088 00089 // This is the Fisher-Yates shuffle (aka Knuth shuffle). 00090 // References: 00091 // R.A. Fisher, F. Yates, (1948) [1938], Statistical tables for biological, agricultural and medical research (3rd ed.). 00092 // R. Durstenfeld, "Algorithm 235: Random permutation", CACM, vol. 7, 1964. 00093 // D.E. Knuth, "The Art of Computer Programming", volume 2, 1969. 00094 00095 // Start with the identity permutation. 00096 const size_t n = model->getLocalNumIdentifiers(); 00097 lno_t *perm; 00098 perm = (lno_t *) (solution->getPermutationRCP().getRawPtr()); 00099 if (perm){ 00100 for (size_t i=0; i<n; i++){ 00101 perm[i] = i; 00102 } 00103 } 00104 else 00105 // throw exception? 00106 ierr = -1; 00107 00108 // Swap random pairs of indices in perm. 00109 lno_t j, temp; 00110 for (lno_t i=n-1; i>0; i--){ 00111 // Choose j randomly in [0,i] 00112 j = rand() % (i+1); 00113 // Swap (perm[i], perm[j]) 00114 temp = perm[i]; 00115 perm[i] = perm[j]; 00116 perm[j] = temp; 00117 } 00118 00119 solution->setHavePerm(true); 00120 return ierr; 00121 00122 } 00123 00124 }; 00125 } 00126 #endif
1.7.6.1