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Zoltan2
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00001 // @HEADER 00002 // 00003 // *********************************************************************** 00004 // 00005 // Zoltan2: A package of combinatorial algorithms for scientific computing 00006 // Copyright 2012 Sandia Corporation 00007 // 00008 // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, 00009 // the U.S. Government retains certain rights in this software. 00010 // 00011 // Redistribution and use in source and binary forms, with or without 00012 // modification, are permitted provided that the following conditions are 00013 // met: 00014 // 00015 // 1. Redistributions of source code must retain the above copyright 00016 // notice, this list of conditions and the following disclaimer. 00017 // 00018 // 2. Redistributions in binary form must reproduce the above copyright 00019 // notice, this list of conditions and the following disclaimer in the 00020 // documentation and/or other materials provided with the distribution. 00021 // 00022 // 3. Neither the name of the Corporation nor the names of the 00023 // contributors may be used to endorse or promote products derived from 00024 // this software without specific prior written permission. 00025 // 00026 // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY 00027 // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00028 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR 00029 // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE 00030 // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 00031 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 00032 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR 00033 // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF 00034 // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING 00035 // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS 00036 // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00037 // 00038 // Questions? Contact Karen Devine (kddevin@sandia.gov) 00039 // Erik Boman (egboman@sandia.gov) 00040 // Siva Rajamanickam (srajama@sandia.gov) 00041 // 00042 // *********************************************************************** 00043 // 00044 // @HEADER 00045 #ifndef _ZOLTAN2_SORTEDDEGREE_HPP_ 00046 #define _ZOLTAN2_SORTEDDEGREE_HPP_ 00047 00048 #include <Zoltan2_Algorithm.hpp> 00049 #include <Zoltan2_GraphModel.hpp> 00050 #include <Zoltan2_OrderingSolution.hpp> 00051 #include <Zoltan2_Sort.hpp> 00052 #include <algorithm> 00053 00054 00059 00060 namespace Zoltan2{ 00061 00062 template <typename Adapter> 00063 class AlgSortedDegree : public Algorithm<Adapter> 00064 { 00065 private: 00066 00067 const RCP<GraphModel<Adapter> > model; 00068 const RCP<Teuchos::ParameterList> &pl; 00069 const RCP<Teuchos::Comm<int> > &comm; 00070 00071 public: 00072 00073 typedef typename Adapter::lno_t lno_t; 00074 typedef typename Adapter::zgid_t zgid_t; 00075 typedef typename Adapter::scalar_t scalar_t; 00076 00077 AlgSortedDegree( 00078 const RCP<GraphModel<Adapter> > &model__, 00079 const RCP<Teuchos::ParameterList> &pl__, 00080 const RCP<Teuchos::Comm<int> > &comm__ 00081 ) : model(model__), pl(pl__), comm(comm__) 00082 { 00083 } 00084 00085 int order(const RCP<OrderingSolution<zgid_t, lno_t> > &solution) 00086 { 00087 int ierr= 0; 00088 00089 HELLO; 00090 00091 lno_t *perm; 00092 perm = (lno_t *) (solution->getPermutation()); 00093 if (perm==0){ 00094 // Throw exception 00095 std::cerr << "perm is NULL" << std::endl; 00096 ierr = -1; 00097 } 00098 00099 // Get local graph. 00100 const size_t nVtx = model->getLocalNumVertices(); 00101 ArrayView<const lno_t> edgeIds; 00102 ArrayView<const lno_t> offsets; 00103 ArrayView<StridedData<lno_t, scalar_t> > wgts; 00104 model->getLocalEdgeList(edgeIds, offsets, wgts); 00105 00106 // Store degrees together with index so we can sort. 00107 Teuchos::Array<std::pair<lno_t, size_t> > degrees(nVtx); 00108 for (lno_t i=0; i<(lno_t)nVtx; i++){ 00109 degrees[i].first = i; 00110 degrees[i].second = offsets[i+1] - offsets[i]; 00111 } 00112 00113 // Sort degrees. 00114 SortPairs<lno_t,size_t> zort; 00115 bool inc = true; // TODO: Add user parameter 00116 zort.sort(degrees, inc); 00117 00118 // Copy permuted indices to perm. 00119 for (lno_t i=0; i<(lno_t)nVtx; i++){ 00120 perm[i] = degrees[i].first; 00121 } 00122 00123 solution->setHavePerm(true); 00124 return ierr; 00125 } 00126 00127 }; 00128 } 00129 #endif
1.7.6.1